polDNAmelt: Local Melting Within Polymeric DNA—An Improved Method and Its Applications.
Sankar Basu and Dhananjay Bhattacharyya*
Journal of Bioinformatics and Intelligent Control 2013, 2 (4): 316-320.   
(pdf)
Publishers: American Scientific Publishers (ISSN: 2326-7496)
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Equilibrium unfolding of cyclophilin from Leishmania donovani: Characterization of intermediate states
Sourav Roy, Sankar Basu, Alok K. Datta, Dhananjay Bhattacharyya, Dipak Dasgupta*, and Rahul Banerjee*
International Journal of Biological Macromolecules, 2014, 69: 353-360.   
(pdf)
Publishers: Elsevier (ISSN: 0141-8130)
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Analysis of Stacking Overlap in Nucleic Acid Structures: Algorithm and Application
Pavan Kumar Pingali, Sukanya Halder, Debasish Mukharjee, Sankar Basu, Rahul Banerjee,
Devapriya Choudhuri and Dhananjay Bhattacharyya*
Journal of Computer-Aided Molecular design, 2014, 28:851–867    
(pdf)
Publishers: Springer Nature (ISSN: 1573-4951)
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The unfolding MD-simulations of Cyclophilin: Analysed by Surface Contact Networks and their associated matrices
Sourav Roy, Sankar Basu, Dipak Dasgupta, Dhananjay Bhattacharyya*, and Rahul Banerjee*
PLOS ONE, 2015, 10(11): e0142173.   
(pdf)
Publishers: PLOS (ISSN: 1932-6203)
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RNAHelix: Computational Modeling of Nucleic Acid Structures with Watson-Crick and Non-canonical Base pairs
Dhananjay Bhattacharyya*, Sukanya Halder, Sankar Basu, Prasun Kumar, Debasish Mukherjee, Manju Bansal*
Journal of Computer-Aided Molecular Design, 2017, 31(2): 219-235   
(pdf)
Publishers: Springer Nature (ISSN: 1573-4951)
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